BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003B04SP1|AL425068
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1161 1739 0.0
>3x_Contig1161
Length = 5308
Score = 1739 bits (874), Expect = 0.0
Identities = 904/913 (99%), Gaps = 3/913 (0%)
Strand = Plus / Plus
Query: 1 cttgaagacaaaccaccaccgctag-aatgtcacccttgacgtagatttccataccatga 59
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4177 cttgaagacaaaccaccaccgctaggaatgtcacccttgacgtagatttccataccatga 4236
Query: 60 actggacccttgaagttgtatttctcttgtaagamttgttgagcgactaggaggccacac 119
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4237 actggacccttgaagttgtatttctcttgtaagaattgttgagcgactaggaggccacac 4296
Query: 120 ttgaaataattggaccagtctgacactgatgggtcaatttcaatcaaggatccatccaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4297 ttgaaataattggaccagtctgacactgatgggtcaatttcaatcaaggatccatccaat 4356
Query: 180 ggtaagtcgaacttacgctgagcaaaattgctatcatgattagtcaaagtaatggatgga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4357 ggtaagtcgaacttacgctgagcaaaattgctatcatgattagtcaaagtaatggatgga 4416
Query: 240 ttctcgctttcagaagttaagcggcacs-tagcatcaaatcgttttcaatagccattggc 298
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4417 ttctcgctttcagaagttaagcggcacgctagcatcaaatcgttttcaatagccattggc 4476
Query: 299 aacactgaaaactgacaataatcgatatgttcaccaatcaaattaactctaccaggagat 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4477 aacactgaaaactgacaataatcgatatgttcaccaatcaaattaactctaccaggagat 4536
Query: 359 ctggttataaaanacttcctggaatcatctgtatcataacattccacaaattcattcttc 418
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4537 ctggttataaaaaacttcctggaatcatctgtatcataacattccacaaattcattcttc 4596
Query: 419 aattgttccaattttggagcgtgagccaaatctgttggcacaataggaacggacattatt 478
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4597 aattgttccaattttggagcgtgagcaaaatctgttggcacaataggaacggacattatt 4656
Query: 479 atttcttatatttcagccttgtttcaaacctgttgtcacttaaaaggattctacgatcaa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4657 atttcttatatttcagccttgtttcaaacctgttgtcacttaaaaggattctacgatcaa 4716
Query: 539 atttccaactttataggttgaatgatattctcacccgtctattgaaagatcaaacctggt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4717 atttccaactttataggttgaatgatattctcacccgtctattgaaagatcaaacctggt 4776
Query: 599 atcaagatatgtctcgaactgtcaaaccttttaaatgtaatttcaattcaatagaacggt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4777 atcaagatatgtctcgaactgtcaaaccttttaaatgtaatttcaattcaatagaacggt 4836
Query: 659 tcttttatagacctttggragcctgctccatcatttaacagaacggctaccgagttttct 718
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4837 tcttttatagacctttggaagcctgctccatcatttaacagaacggctaccgagttttct 4896
Query: 719 tcggatcacttcaatccgtatcacgtgatacatacggattgaacgaatccgctctacgga 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4897 tcggatcacttcaatccgtatcacgtgatacatacggattgaacgaatccgctctacgga 4956
Query: 779 atacaccaatccggaatgagcggaagamtatgccccggatgccccagatttttcgtttct 838
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4957 atacaccaatccggaatgagcggaagactatgccccggatgccccagatttttcgtttct 5016
Query: 839 cagcaggcaagctaccgaccgtactattggtaacgagagatgagttaggaatt-aacacc 897
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5017 cagcaggcaagctaccgaccgtactattggtaacgagagatgagttaggaattaaacacc 5076
Query: 898 gtgaaagaaggaa 910
|||||||||||||
Sbjct: 5077 gtgaaagaaggaa 5089
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6865
Number of Sequences: 1807
Number of extensions: 6865
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)